Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox30Q8CGW4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Gm10517-202ENSMUST00000192970 758 ntBASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox30Q8CGW4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox30Q8CGW4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox30Q8CGW4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.68■□□□□ 0.58
Sox30Q8CGW4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms