Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.27■□□□□ 0.03
ShfQ8CG80 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
ShfQ8CG80 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ShfQ8CG80 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.26■□□□□ 0.03
ShfQ8CG80 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.26■□□□□ 0.03
ShfQ8CG80 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ShfQ8CG80 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ShfQ8CG80 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ShfQ8CG80 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Gm37292-201ENSMUST00000192062 758 ntBASIC15.25■□□□□ 0.03
ShfQ8CG80 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.25■□□□□ 0.03
ShfQ8CG80 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
ShfQ8CG80 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.25■□□□□ 0.03
ShfQ8CG80 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ShfQ8CG80 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
ShfQ8CG80 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ShfQ8CG80 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.24■□□□□ 0.03
ShfQ8CG80 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Gm12382-201ENSMUST00000122005 922 ntBASIC15.24■□□□□ 0.03
ShfQ8CG80 Gm24841-201ENSMUST00000158676 357 ntBASIC15.24■□□□□ 0.03
ShfQ8CG80 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.24■□□□□ 0.03
ShfQ8CG80 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShfQ8CG80 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ShfQ8CG80 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ShfQ8CG80 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ShfQ8CG80 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.23■□□□□ 0.03
ShfQ8CG80 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Gm10602-201ENSMUST00000098239 609 ntBASIC15.23■□□□□ 0.03
ShfQ8CG80 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ShfQ8CG80 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShfQ8CG80 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms