Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lin9Q8C735 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lin9Q8C735 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lin9Q8C735 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Lin9Q8C735 Gm3375-201ENSMUST00000203929 796 ntBASIC18.71■□□□□ 0.59
Lin9Q8C735 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Lin9Q8C735 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lin9Q8C735 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lin9Q8C735 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lin9Q8C735 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lin9Q8C735 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.7■□□□□ 0.58
Lin9Q8C735 Gm11539-201ENSMUST00000119837 557 ntBASIC18.7■□□□□ 0.58
Lin9Q8C735 Gm13436-201ENSMUST00000120418 567 ntBASIC18.7■□□□□ 0.58
Lin9Q8C735 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lin9Q8C735 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.7■□□□□ 0.58
Lin9Q8C735 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lin9Q8C735 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Lin9Q8C735 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Lin9Q8C735 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.69■□□□□ 0.58
Lin9Q8C735 Gm13559-201ENSMUST00000120476 863 ntBASIC18.69■□□□□ 0.58
Lin9Q8C735 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.69■□□□□ 0.58
Lin9Q8C735 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.69■□□□□ 0.58
Lin9Q8C735 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.69■□□□□ 0.58
Lin9Q8C735 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lin9Q8C735 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.68■□□□□ 0.58
Lin9Q8C735 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Lin9Q8C735 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Lin9Q8C735 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lin9Q8C735 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin9Q8C735 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lin9Q8C735 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lin9Q8C735 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lin9Q8C735 Gm7889-201ENSMUST00000185591 958 ntBASIC18.67■□□□□ 0.58
Lin9Q8C735 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lin9Q8C735 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lin9Q8C735 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lin9Q8C735 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lin9Q8C735 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin9Q8C735 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin9Q8C735 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin9Q8C735 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms