Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm12350-201ENSMUST00000121208 462 ntBASIC23.06■■□□□ 1.28
Cps1Q8C196 Gm7862-201ENSMUST00000121461 292 ntBASIC23.06■■□□□ 1.28
Cps1Q8C196 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Cps1Q8C196 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cps1Q8C196 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cps1Q8C196 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cps1Q8C196 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cps1Q8C196 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cps1Q8C196 Gm32996-201ENSMUST00000199828 1447 ntBASIC23.06■■□□□ 1.28
Cps1Q8C196 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC23.05■■□□□ 1.28
Cps1Q8C196 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Cps1Q8C196 Gm10060-201ENSMUST00000212002 111 ntBASIC23.05■■□□□ 1.28
Cps1Q8C196 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC23.05■■□□□ 1.28
Cps1Q8C196 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC23.05■■□□□ 1.28
Cps1Q8C196 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cps1Q8C196 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Cps1Q8C196 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC23.04■■□□□ 1.28
Cps1Q8C196 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 AC160338.1-201ENSMUST00000214232 705 ntBASIC23.04■■□□□ 1.28
Cps1Q8C196 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Cps1Q8C196 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cps1Q8C196 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC23.03■■□□□ 1.28
Cps1Q8C196 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Cps1Q8C196 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cps1Q8C196 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Cps1Q8C196 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Cps1Q8C196 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC23.02■■□□□ 1.28
Cps1Q8C196 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC23.02■■□□□ 1.28
Cps1Q8C196 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cps1Q8C196 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cps1Q8C196 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cps1Q8C196 Gm1401-201ENSMUST00000122048 772 ntBASIC23.01■■□□□ 1.27
Cps1Q8C196 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC23.01■■□□□ 1.27
Cps1Q8C196 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC23.01■■□□□ 1.27
Cps1Q8C196 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC23.01■■□□□ 1.27
Cps1Q8C196 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cps1Q8C196 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cps1Q8C196 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Cps1Q8C196 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Cps1Q8C196 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cps1Q8C196 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Cps1Q8C196 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Cps1Q8C196 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Cps1Q8C196 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC23■■□□□ 1.27
Cps1Q8C196 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cps1Q8C196 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Cps1Q8C196 Gfra2-202ENSMUST00000227633 1480 ntBASIC23■■□□□ 1.27
Cps1Q8C196 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23■■□□□ 1.27
Cps1Q8C196 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cps1Q8C196 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cps1Q8C196 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC22.99■■□□□ 1.27
Cps1Q8C196 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 CT009713.7-201ENSMUST00000224689 571 ntBASIC22.99■■□□□ 1.27
Cps1Q8C196 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 AL590614.2-201ENSMUST00000225374 1937 ntBASIC22.99■■□□□ 1.27
Cps1Q8C196 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cps1Q8C196 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
Cps1Q8C196 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.98■■□□□ 1.27
Cps1Q8C196 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cps1Q8C196 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms