Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf7Q8BTV2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Gm44549-201ENSMUST00000208351 577 ntBASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf7Q8BTV2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpsf7Q8BTV2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf7Q8BTV2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cpsf7Q8BTV2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms