Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Gm7638-201ENSMUST00000121348 967 ntBASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sfr1Q8BP27 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sfr1Q8BP27 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sfr1Q8BP27 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Gm9731-201ENSMUST00000209480 747 ntBASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sfr1Q8BP27 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Gm15565-201ENSMUST00000118890 427 ntBASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Gm17661-201ENSMUST00000170317 270 ntBASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms