Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Gm1818-201ENSMUST00000169406 1184 ntBASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Mir5131-201ENSMUST00000175426 93 ntBASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 AC108846.1-201ENSMUST00000214531 513 ntBASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Gm13312-201ENSMUST00000119631 718 ntBASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Gm29707-201ENSMUST00000196325 491 ntBASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col16a1Q8BLX7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col16a1Q8BLX7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col16a1Q8BLX7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Gm12350-201ENSMUST00000121208 462 ntBASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Cmtm5-203ENSMUST00000227441 610 ntBASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Grk6-206ENSMUST00000224995 2971 ntBASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col16a1Q8BLX7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col16a1Q8BLX7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Rprl3-201ENSMUST00000157400 290 ntBASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 AC160338.1-201ENSMUST00000214232 705 ntBASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col16a1Q8BLX7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col16a1Q8BLX7 Zfp264-201ENSMUST00000208656 1563 ntBASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col16a1Q8BLX7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms