Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh20Q8BIZ0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Gm6576-201ENSMUST00000169678 883 ntBASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh20Q8BIZ0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Mir6349-201ENSMUST00000184059 97 ntBASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh20Q8BIZ0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh20Q8BIZ0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Gm10252-201ENSMUST00000209541 832 ntBASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh20Q8BIZ0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh20Q8BIZ0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms