Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SynbQ8BI41 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SynbQ8BI41 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynbQ8BI41 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SynbQ8BI41 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.3■□□□□ 0.2
SynbQ8BI41 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.3■□□□□ 0.2
SynbQ8BI41 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.3■□□□□ 0.2
SynbQ8BI41 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynbQ8BI41 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.29■□□□□ 0.2
SynbQ8BI41 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SynbQ8BI41 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SynbQ8BI41 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.29■□□□□ 0.2
SynbQ8BI41 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.29■□□□□ 0.2
SynbQ8BI41 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.29■□□□□ 0.2
SynbQ8BI41 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynbQ8BI41 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SynbQ8BI41 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynbQ8BI41 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.27■□□□□ 0.2
SynbQ8BI41 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SynbQ8BI41 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynbQ8BI41 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SynbQ8BI41 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms