Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Gm15375-201ENSMUST00000119510 849 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Gm11643-201ENSMUST00000119578 864 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Mir6349-201ENSMUST00000184059 97 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Gm2559-201ENSMUST00000201323 363 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf38Q8BI21 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Gm13216-201ENSMUST00000117145 591 ntBASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Gm12896-201ENSMUST00000118430 226 ntBASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf38Q8BI21 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf38Q8BI21 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Rnf38Q8BI21 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms