Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh19Q80TF3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh19Q80TF3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh19Q80TF3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Gm25016-201ENSMUST00000158399 131 ntBASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh19Q80TF3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gm21559-201ENSMUST00000220638 855 ntBASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gm8587-201ENSMUST00000076538 843 ntBASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdh19Q80TF3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms