Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn4bQ7M729 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.65■□□□□ 0.26
Scn4bQ7M729 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.65■□□□□ 0.26
Scn4bQ7M729 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn4bQ7M729 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn4bQ7M729 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.63■□□□□ 0.25
Scn4bQ7M729 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.63■□□□□ 0.25
Scn4bQ7M729 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn4bQ7M729 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.62■□□□□ 0.25
Scn4bQ7M729 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn4bQ7M729 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.61■□□□□ 0.25
Scn4bQ7M729 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn4bQ7M729 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms