Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup188Q6ZQH8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.3■□□□□ 0.84
Nup188Q6ZQH8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Gm27702-201ENSMUST00000184512 56 ntBASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nup188Q6ZQH8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Gm15165-201ENSMUST00000118140 502 ntBASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup188Q6ZQH8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nup188Q6ZQH8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nup188Q6ZQH8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nup188Q6ZQH8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Mir5131-201ENSMUST00000175426 93 ntBASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nup188Q6ZQH8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms