Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf8Q6DID3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Scaf8Q6DID3 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.95■□□□□ 0.78
Scaf8Q6DID3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Gm27702-201ENSMUST00000184512 56 ntBASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scaf8Q6DID3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Gm11779-201ENSMUST00000118541 368 ntBASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Gm43575-201ENSMUST00000196420 516 ntBASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf8Q6DID3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Gm12350-201ENSMUST00000121208 462 ntBASIC19.93■□□□□ 0.78
Scaf8Q6DID3 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Gm5264-201ENSMUST00000190584 848 ntBASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf8Q6DID3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Gm27000-201ENSMUST00000182943 842 ntBASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.92■□□□□ 0.78
Scaf8Q6DID3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scaf8Q6DID3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf8Q6DID3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.9■□□□□ 0.78
Scaf8Q6DID3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf8Q6DID3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Gm13186-201ENSMUST00000118031 316 ntBASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf8Q6DID3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms