Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six3Q62233 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six3Q62233 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.73■□□□□ 0.27
Six3Q62233 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six3Q62233 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.73■□□□□ 0.27
Six3Q62233 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six3Q62233 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Six3Q62233 Gm43183-201ENSMUST00000200632 547 ntBASIC16.72■□□□□ 0.27
Six3Q62233 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Six3Q62233 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.72■□□□□ 0.27
Six3Q62233 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six3Q62233 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Six3Q62233 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.71■□□□□ 0.27
Six3Q62233 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.71■□□□□ 0.27
Six3Q62233 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.71■□□□□ 0.27
Six3Q62233 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.71■□□□□ 0.27
Six3Q62233 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six3Q62233 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Six3Q62233 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Six3Q62233 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Six3Q62233 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six3Q62233 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Six3Q62233 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.69■□□□□ 0.26
Six3Q62233 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.69■□□□□ 0.26
Six3Q62233 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.69■□□□□ 0.26
Six3Q62233 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six3Q62233 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six3Q62233 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Six3Q62233 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six3Q62233 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.68■□□□□ 0.26
Six3Q62233 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Six3Q62233 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
Six3Q62233 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.67■□□□□ 0.26
Six3Q62233 Gm5643-201ENSMUST00000117081 966 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms