Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Notch3Q61982 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Notch3Q61982 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Notch3Q61982 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.12□□□□□ -0.31
Notch3Q61982 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Notch3Q61982 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Notch3Q61982 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Notch3Q61982 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Notch3Q61982 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Notch3Q61982 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.12□□□□□ -0.31
Notch3Q61982 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.11□□□□□ -0.31
Notch3Q61982 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.11□□□□□ -0.31
Notch3Q61982 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Notch3Q61982 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.11□□□□□ -0.31
Notch3Q61982 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Gm7791-201ENSMUST00000219066 539 ntBASIC13.11□□□□□ -0.31
Notch3Q61982 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Gm5867-201ENSMUST00000063197 592 ntBASIC13.11□□□□□ -0.31
Notch3Q61982 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.11□□□□□ -0.31
Notch3Q61982 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Notch3Q61982 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Notch3Q61982 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Notch3Q61982 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Notch3Q61982 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Gm7638-201ENSMUST00000121348 967 ntBASIC13.1□□□□□ -0.31
Notch3Q61982 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Notch3Q61982 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Notch3Q61982 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.1□□□□□ -0.31
Notch3Q61982 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.1□□□□□ -0.31
Notch3Q61982 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Notch3Q61982 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.1□□□□□ -0.31
Notch3Q61982 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Notch3Q61982 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Notch3Q61982 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.1□□□□□ -0.31
Notch3Q61982 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Notch3Q61982 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Notch3Q61982 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.09□□□□□ -0.31
Notch3Q61982 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Notch3Q61982 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.09□□□□□ -0.31
Notch3Q61982 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Notch3Q61982 Mir5130-201ENSMUST00000175160 84 ntBASIC13.08□□□□□ -0.31
Notch3Q61982 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Notch3Q61982 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.08□□□□□ -0.31
Notch3Q61982 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Notch3Q61982 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Gm16061-201ENSMUST00000122167 857 ntBASIC13.08□□□□□ -0.32
Notch3Q61982 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Gm27704-201ENSMUST00000185094 107 ntBASIC13.08□□□□□ -0.32
Notch3Q61982 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.08□□□□□ -0.32
Notch3Q61982 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Notch3Q61982 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Notch3Q61982 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Notch3Q61982 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms