Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.77■□□□□ 0.12
Clcn4Q61418 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.77■□□□□ 0.12
Clcn4Q61418 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Gm29791-202ENSMUST00000207888 369 ntBASIC15.77■□□□□ 0.12
Clcn4Q61418 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Clcn4Q61418 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcn4Q61418 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcn4Q61418 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Clcn4Q61418 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcn4Q61418 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcn4Q61418 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clcn4Q61418 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clcn4Q61418 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Clcn4Q61418 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcn4Q61418 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Clcn4Q61418 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.76■□□□□ 0.11
Clcn4Q61418 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.76■□□□□ 0.11
Clcn4Q61418 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.76■□□□□ 0.11
Clcn4Q61418 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcn4Q61418 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Clcn4Q61418 Gm11249-201ENSMUST00000117071 859 ntBASIC15.75■□□□□ 0.11
Clcn4Q61418 Mir6349-201ENSMUST00000184059 97 ntBASIC15.75■□□□□ 0.11
Clcn4Q61418 Gm10138-203ENSMUST00000206952 366 ntBASIC15.75■□□□□ 0.11
Clcn4Q61418 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Clcn4Q61418 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.75■□□□□ 0.11
Clcn4Q61418 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.75■□□□□ 0.11
Clcn4Q61418 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clcn4Q61418 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Gm15378-201ENSMUST00000121894 207 ntBASIC15.74■□□□□ 0.11
Clcn4Q61418 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clcn4Q61418 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.74■□□□□ 0.11
Clcn4Q61418 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Clcn4Q61418 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Gm13158-201ENSMUST00000122007 736 ntBASIC15.73■□□□□ 0.11
Clcn4Q61418 Mir2861-201ENSMUST00000175539 82 ntBASIC15.73■□□□□ 0.11
Clcn4Q61418 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms