Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Traf4Q61382 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.18■□□□□ 0.02
Traf4Q61382 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.18■□□□□ 0.02
Traf4Q61382 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.17■□□□□ 0.02
Traf4Q61382 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.17■□□□□ 0.02
Traf4Q61382 Gm12382-201ENSMUST00000122005 922 ntBASIC15.17■□□□□ 0.02
Traf4Q61382 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.17■□□□□ 0.02
Traf4Q61382 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.17■□□□□ 0.02
Traf4Q61382 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Traf4Q61382 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.17■□□□□ 0.02
Traf4Q61382 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Traf4Q61382 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Traf4Q61382 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Traf4Q61382 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.16■□□□□ 0.02
Traf4Q61382 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.16■□□□□ 0.02
Traf4Q61382 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Traf4Q61382 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Traf4Q61382 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Traf4Q61382 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.16■□□□□ 0.02
Traf4Q61382 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Gm6433-201ENSMUST00000118634 875 ntBASIC15.16■□□□□ 0.02
Traf4Q61382 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Gm43799-201ENSMUST00000201845 579 ntBASIC15.16■□□□□ 0.02
Traf4Q61382 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.16■□□□□ 0.02
Traf4Q61382 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.16■□□□□ 0.02
Traf4Q61382 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Traf4Q61382 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Traf4Q61382 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Traf4Q61382 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.15■□□□□ 0.02
Traf4Q61382 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Traf4Q61382 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Traf4Q61382 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Traf4Q61382 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.15■□□□□ 0.02
Traf4Q61382 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Traf4Q61382 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.15■□□□□ 0.02
Traf4Q61382 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Traf4Q61382 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Traf4Q61382 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Traf4Q61382 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Traf4Q61382 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Gm30025-201ENSMUST00000218555 728 ntBASIC15.14■□□□□ 0.01
Traf4Q61382 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Traf4Q61382 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Traf4Q61382 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms