Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Rps4l-201ENSMUST00000071745 943 ntBASIC16.66■□□□□ 0.26
Sim2Q61079 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sim2Q61079 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sim2Q61079 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim2Q61079 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sim2Q61079 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.66■□□□□ 0.26
Sim2Q61079 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.66■□□□□ 0.26
Sim2Q61079 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim2Q61079 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sim2Q61079 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Gm11336-201ENSMUST00000118168 334 ntBASIC16.65■□□□□ 0.26
Sim2Q61079 Gm15372-201ENSMUST00000120729 834 ntBASIC16.65■□□□□ 0.26
Sim2Q61079 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.65■□□□□ 0.26
Sim2Q61079 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.65■□□□□ 0.26
Sim2Q61079 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sim2Q61079 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.65■□□□□ 0.26
Sim2Q61079 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sim2Q61079 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Sim2Q61079 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Sim2Q61079 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Gm12644-201ENSMUST00000119935 606 ntBASIC16.64■□□□□ 0.25
Sim2Q61079 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.64■□□□□ 0.25
Sim2Q61079 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.64■□□□□ 0.25
Sim2Q61079 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.64■□□□□ 0.25
Sim2Q61079 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sim2Q61079 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sim2Q61079 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sim2Q61079 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.63■□□□□ 0.25
Sim2Q61079 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sim2Q61079 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sim2Q61079 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.63■□□□□ 0.25
Sim2Q61079 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.63■□□□□ 0.25
Sim2Q61079 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.63■□□□□ 0.25
Sim2Q61079 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sim2Q61079 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.63■□□□□ 0.25
Sim2Q61079 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.63■□□□□ 0.25
Sim2Q61079 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sim2Q61079 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.63■□□□□ 0.25
Sim2Q61079 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sim2Q61079 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sim2Q61079 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.62■□□□□ 0.25
Sim2Q61079 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Gm2213-201ENSMUST00000197485 688 ntBASIC16.62■□□□□ 0.25
Sim2Q61079 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.62■□□□□ 0.25
Sim2Q61079 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sim2Q61079 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Sim2Q61079 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.62■□□□□ 0.25
Sim2Q61079 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.62■□□□□ 0.25
Sim2Q61079 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sim2Q61079 BC021767-201ENSMUST00000126387 1716 ntBASIC16.62■□□□□ 0.25
Sim2Q61079 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim2Q61079 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim2Q61079 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim2Q61079 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim2Q61079 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.61■□□□□ 0.25
Sim2Q61079 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim2Q61079 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sim2Q61079 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Sim2Q61079 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Sim2Q61079 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sim2Q61079 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms