Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pabpn1lQ5XFR0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pabpn1lQ5XFR0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pabpn1lQ5XFR0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.14■□□□□ 0.33
Pabpn1lQ5XFR0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pabpn1lQ5XFR0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms