Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 AC154454.1-201ENSMUST00000225253 216 ntBASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Nsd1-206ENSMUST00000224918 1001 ntBASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3-1Q5R1I8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-1Q5R1I8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-1Q5R1I8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav3-1Q5R1I8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-1Q5R1I8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-1Q5R1I8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-1Q5R1I8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms