Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-4Q5R1H9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-4Q5R1H9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7d-4Q5R1H9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Trav7d-4Q5R1H9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trav7d-4Q5R1H9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7d-4Q5R1H9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-4Q5R1H9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav7d-4Q5R1H9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms