Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Gm20760-201ENSMUST00000179197 648 ntBASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.73□□□□□ -0.05
Trav5d-4Q5R1F6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5d-4Q5R1F6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5d-4Q5R1F6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5d-4Q5R1F6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Trav5d-4Q5R1F6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5d-4Q5R1F6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Gm13168-201ENSMUST00000121771 632 ntBASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5d-4Q5R1F6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5d-4Q5R1F6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms