Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Gm11421-201ENSMUST00000122124 294 ntBASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-3Q5R1C3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-3Q5R1C3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Gm27801-201ENSMUST00000184174 223 ntBASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-3Q5R1C3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-3Q5R1C3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms