Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Phf7-203ENSMUST00000226565 1971 ntBASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Gm6376-201ENSMUST00000209407 580 ntBASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8d-2Q5R1B6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8d-2Q5R1B6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Gm13312-201ENSMUST00000119631 718 ntBASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Gm1401-201ENSMUST00000122048 772 ntBASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trav8d-2Q5R1B6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Gm7862-201ENSMUST00000121461 292 ntBASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Gm29707-201ENSMUST00000196325 491 ntBASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8d-2Q5R1B6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav8d-2Q5R1B6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav8d-2Q5R1B6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms