Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.14■□□□□ 0.33
Fam196aQ3USH1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Gm15165-201ENSMUST00000118140 502 ntBASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Gm14822-201ENSMUST00000122247 291 ntBASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam196aQ3USH1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam196aQ3USH1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam196aQ3USH1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam196aQ3USH1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Gm14494-201ENSMUST00000118786 435 ntBASIC17.09■□□□□ 0.33
Fam196aQ3USH1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms