Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Mir5122-201ENSMUST00000175004 89 ntBASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rapgef1Q3UHC1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Gm42545-201ENSMUST00000202755 922 ntBASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Gm18025-201ENSMUST00000221733 862 ntBASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rapgef1Q3UHC1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rapgef1Q3UHC1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Gm43183-201ENSMUST00000200632 547 ntBASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rapgef1Q3UHC1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rapgef1Q3UHC1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rapgef1Q3UHC1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rapgef1Q3UHC1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rapgef1Q3UHC1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rapgef1Q3UHC1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms