Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.23□□□□□ -0.13
Tff1Q08423 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Mtag2-201ENSMUST00000058665 714 ntBASIC14.23□□□□□ -0.13
Tff1Q08423 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff1Q08423 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tff1Q08423 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff1Q08423 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tff1Q08423 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tff1Q08423 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tff1Q08423 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tff1Q08423 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.22□□□□□ -0.13
Tff1Q08423 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.22□□□□□ -0.13
Tff1Q08423 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.22□□□□□ -0.13
Tff1Q08423 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Gm44549-201ENSMUST00000208351 577 ntBASIC14.22□□□□□ -0.13
Tff1Q08423 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.22□□□□□ -0.13
Tff1Q08423 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tff1Q08423 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.22□□□□□ -0.13
Tff1Q08423 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tff1Q08423 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tff1Q08423 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Tff1Q08423 Gm715-201ENSMUST00000117865 831 ntBASIC14.21□□□□□ -0.13
Tff1Q08423 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tff1Q08423 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.21□□□□□ -0.13
Tff1Q08423 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.21□□□□□ -0.13
Tff1Q08423 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.21□□□□□ -0.13
Tff1Q08423 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Zfp783-201ENSMUST00000095946 670 ntBASIC14.21□□□□□ -0.13
Tff1Q08423 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff1Q08423 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tff1Q08423 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Tff1Q08423 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff1Q08423 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff1Q08423 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.21□□□□□ -0.14
Tff1Q08423 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff1Q08423 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff1Q08423 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff1Q08423 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tff1Q08423 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.2□□□□□ -0.14
Tff1Q08423 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.2□□□□□ -0.14
Tff1Q08423 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.2□□□□□ -0.14
Tff1Q08423 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.2□□□□□ -0.14
Tff1Q08423 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Tff1Q08423 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff1Q08423 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms