Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.78■□□□□ 0.28
Col9a1Q05722 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.77■□□□□ 0.28
Col9a1Q05722 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.77■□□□□ 0.28
Col9a1Q05722 Mir6977-201ENSMUST00000184960 64 ntBASIC16.77■□□□□ 0.28
Col9a1Q05722 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.77■□□□□ 0.28
Col9a1Q05722 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.77■□□□□ 0.28
Col9a1Q05722 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col9a1Q05722 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col9a1Q05722 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Gm45251-201ENSMUST00000209486 1465 ntBASIC16.77■□□□□ 0.28
Col9a1Q05722 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col9a1Q05722 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col9a1Q05722 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Col9a1Q05722 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Col9a1Q05722 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col9a1Q05722 Gm25990-201ENSMUST00000102440 86 ntBASIC16.76■□□□□ 0.27
Col9a1Q05722 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.76■□□□□ 0.27
Col9a1Q05722 Gm11780-201ENSMUST00000136880 516 ntBASIC16.76■□□□□ 0.27
Col9a1Q05722 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.76■□□□□ 0.27
Col9a1Q05722 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Gm18515-201ENSMUST00000219755 797 ntBASIC16.76■□□□□ 0.27
Col9a1Q05722 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.76■□□□□ 0.27
Col9a1Q05722 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col9a1Q05722 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Col9a1Q05722 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col9a1Q05722 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.76■□□□□ 0.27
Col9a1Q05722 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col9a1Q05722 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.75■□□□□ 0.27
Col9a1Q05722 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col9a1Q05722 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.75■□□□□ 0.27
Col9a1Q05722 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col9a1Q05722 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Gm12428-201ENSMUST00000119844 727 ntBASIC16.74■□□□□ 0.27
Col9a1Q05722 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col9a1Q05722 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.74■□□□□ 0.27
Col9a1Q05722 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col9a1Q05722 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col9a1Q05722 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col9a1Q05722 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col9a1Q05722 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col9a1Q05722 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.73■□□□□ 0.27
Col9a1Q05722 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col9a1Q05722 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col9a1Q05722 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.73■□□□□ 0.27
Col9a1Q05722 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col9a1Q05722 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms