Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Gm43137-201ENSMUST00000198052 594 ntBASIC15.7■□□□□ 0.1
Lsm3P62311 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lsm3P62311 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm3P62311 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm3P62311 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm3P62311 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
Lsm3P62311 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm3P62311 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lsm3P62311 Smad6-203ENSMUST00000179458 273 ntBASIC15.69■□□□□ 0.1
Lsm3P62311 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.69■□□□□ 0.1
Lsm3P62311 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm3P62311 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lsm3P62311 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.68■□□□□ 0.1
Lsm3P62311 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.68■□□□□ 0.1
Lsm3P62311 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Lsm3P62311 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lsm3P62311 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm3P62311 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Lsm3P62311 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lsm3P62311 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Lsm3P62311 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.67■□□□□ 0.1
Lsm3P62311 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Lsm3P62311 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lsm3P62311 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.67■□□□□ 0.1
Lsm3P62311 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lsm3P62311 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lsm3P62311 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Lsm3P62311 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lsm3P62311 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.66■□□□□ 0.1
Lsm3P62311 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lsm3P62311 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lsm3P62311 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lsm3P62311 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lsm3P62311 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Lsm3P62311 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms