Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rpl27P61358 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpl27P61358 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpl27P61358 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpl27P61358 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpl27P61358 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.28■□□□□ 0.04
Rpl27P61358 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.28■□□□□ 0.04
Rpl27P61358 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpl27P61358 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl27P61358 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.27■□□□□ 0.04
Rpl27P61358 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rpl27P61358 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.27■□□□□ 0.04
Rpl27P61358 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl27P61358 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.27■□□□□ 0.03
Rpl27P61358 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl27P61358 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl27P61358 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl27P61358 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpl27P61358 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpl27P61358 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpl27P61358 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpl27P61358 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl27P61358 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rpl27P61358 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.25■□□□□ 0.03
Rpl27P61358 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpl27P61358 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.25■□□□□ 0.03
Rpl27P61358 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Gm37025-201ENSMUST00000195159 829 ntBASIC15.25■□□□□ 0.03
Rpl27P61358 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.25■□□□□ 0.03
Rpl27P61358 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Rpl27P61358 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl27P61358 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl27P61358 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.24■□□□□ 0.03
Rpl27P61358 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpl27P61358 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Rpl27P61358 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpl27P61358 Gm13168-201ENSMUST00000121771 632 ntBASIC15.24■□□□□ 0.03
Rpl27P61358 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpl27P61358 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl27P61358 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl27P61358 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl27P61358 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpl27P61358 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rpl27P61358 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rpl27P61358 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl27P61358 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl27P61358 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms