Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rrp1P56183 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rrp1P56183 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rrp1P56183 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Gm5408-201ENSMUST00000197998 747 ntBASIC19.3■□□□□ 0.68
Rrp1P56183 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.3■□□□□ 0.68
Rrp1P56183 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.3■□□□□ 0.68
Rrp1P56183 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.3■□□□□ 0.68
Rrp1P56183 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.3■□□□□ 0.68
Rrp1P56183 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rrp1P56183 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Rrp1P56183 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rrp1P56183 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rrp1P56183 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.29■□□□□ 0.68
Rrp1P56183 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Rrp1P56183 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.29■□□□□ 0.68
Rrp1P56183 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.29■□□□□ 0.68
Rrp1P56183 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Rrp1P56183 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Rrp1P56183 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1P56183 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.28■□□□□ 0.68
Rrp1P56183 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rrp1P56183 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.28■□□□□ 0.68
Rrp1P56183 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.28■□□□□ 0.68
Rrp1P56183 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.28■□□□□ 0.68
Rrp1P56183 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Rrp1P56183 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rrp1P56183 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1P56183 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Rrp1P56183 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rrp1P56183 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.27■□□□□ 0.68
Rrp1P56183 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rrp1P56183 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1P56183 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp1P56183 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp1P56183 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp1P56183 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.26■□□□□ 0.67
Rrp1P56183 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rrp1P56183 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.26■□□□□ 0.67
Rrp1P56183 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rrp1P56183 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Gm11249-201ENSMUST00000117071 859 ntBASIC19.26■□□□□ 0.67
Rrp1P56183 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.26■□□□□ 0.67
Rrp1P56183 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1P56183 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rrp1P56183 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rrp1P56183 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms