Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.94■□□□□ 0.3
Atxn1P54254 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Gm6623-201ENSMUST00000173570 544 ntBASIC16.94■□□□□ 0.3
Atxn1P54254 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.94■□□□□ 0.3
Atxn1P54254 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Atxn1P54254 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Atxn1P54254 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.94■□□□□ 0.3
Atxn1P54254 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atxn1P54254 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Atxn1P54254 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Gm27459-201ENSMUST00000184860 107 ntBASIC16.93■□□□□ 0.3
Atxn1P54254 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.93■□□□□ 0.3
Atxn1P54254 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.93■□□□□ 0.3
Atxn1P54254 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.93■□□□□ 0.3
Atxn1P54254 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atxn1P54254 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.92■□□□□ 0.3
Atxn1P54254 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Atxn1P54254 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.92■□□□□ 0.3
Atxn1P54254 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.92■□□□□ 0.3
Atxn1P54254 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.92■□□□□ 0.3
Atxn1P54254 Gm18733-201ENSMUST00000173950 856 ntBASIC16.92■□□□□ 0.3
Atxn1P54254 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Atxn1P54254 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Atxn1P54254 Gm27525-201ENSMUST00000184465 107 ntBASIC16.92■□□□□ 0.3
Atxn1P54254 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.92■□□□□ 0.3
Atxn1P54254 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Atxn1P54254 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.92■□□□□ 0.3
Atxn1P54254 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atxn1P54254 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Atxn1P54254 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Atxn1P54254 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.91■□□□□ 0.3
Atxn1P54254 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.91■□□□□ 0.3
Atxn1P54254 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.91■□□□□ 0.3
Atxn1P54254 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Atxn1P54254 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Atxn1P54254 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atxn1P54254 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.9■□□□□ 0.3
Atxn1P54254 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atxn1P54254 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Atxn1P54254 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.9■□□□□ 0.3
Atxn1P54254 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atxn1P54254 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atxn1P54254 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Atxn1P54254 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms