Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Lbx1P52955 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lbx1P52955 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lbx1P52955 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.52■□□□□ 0.23
Lbx1P52955 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Lbx1P52955 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.52■□□□□ 0.23
Lbx1P52955 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lbx1P52955 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.51■□□□□ 0.23
Lbx1P52955 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lbx1P52955 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lbx1P52955 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.5■□□□□ 0.23
Lbx1P52955 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.5■□□□□ 0.23
Lbx1P52955 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.5■□□□□ 0.23
Lbx1P52955 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.5■□□□□ 0.23
Lbx1P52955 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lbx1P52955 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lbx1P52955 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
Lbx1P52955 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lbx1P52955 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.49■□□□□ 0.23
Lbx1P52955 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.49■□□□□ 0.23
Lbx1P52955 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.49■□□□□ 0.23
Lbx1P52955 Gm7230-201ENSMUST00000173026 815 ntBASIC16.49■□□□□ 0.23
Lbx1P52955 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.49■□□□□ 0.23
Lbx1P52955 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Lbx1P52955 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lbx1P52955 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lbx1P52955 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.48■□□□□ 0.23
Lbx1P52955 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.48■□□□□ 0.23
Lbx1P52955 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.48■□□□□ 0.23
Lbx1P52955 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.48■□□□□ 0.23
Lbx1P52955 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.48■□□□□ 0.23
Lbx1P52955 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.48■□□□□ 0.23
Lbx1P52955 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lbx1P52955 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.48■□□□□ 0.23
Lbx1P52955 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.48■□□□□ 0.23
Lbx1P52955 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lbx1P52955 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lbx1P52955 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lbx1P52955 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lbx1P52955 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lbx1P52955 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms