Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CcnfP51944 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcnfP51944 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.31■□□□□ 0.2
CcnfP51944 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcnfP51944 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CcnfP51944 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.3■□□□□ 0.2
CcnfP51944 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.3■□□□□ 0.2
CcnfP51944 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.3■□□□□ 0.2
CcnfP51944 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcnfP51944 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.29■□□□□ 0.2
CcnfP51944 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.29■□□□□ 0.2
CcnfP51944 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CcnfP51944 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CcnfP51944 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Gm11927-201ENSMUST00000118472 759 ntBASIC16.29■□□□□ 0.2
CcnfP51944 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CcnfP51944 Mir6349-201ENSMUST00000184059 97 ntBASIC16.29■□□□□ 0.2
CcnfP51944 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.29■□□□□ 0.2
CcnfP51944 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.29■□□□□ 0.2
CcnfP51944 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.29■□□□□ 0.2
CcnfP51944 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.29■□□□□ 0.2
CcnfP51944 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CcnfP51944 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcnfP51944 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CcnfP51944 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.28■□□□□ 0.2
CcnfP51944 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CcnfP51944 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.28■□□□□ 0.2
CcnfP51944 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CcnfP51944 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcnfP51944 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CcnfP51944 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CcnfP51944 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CcnfP51944 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.27■□□□□ 0.2
CcnfP51944 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Gm7290-201ENSMUST00000104990 617 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Gm12918-201ENSMUST00000120234 636 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Gm15710-201ENSMUST00000121821 636 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Gm5075-201ENSMUST00000196916 622 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Gm18671-201ENSMUST00000214826 683 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.27■□□□□ 0.2
CcnfP51944 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcnfP51944 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CcnfP51944 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CcnfP51944 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CcnfP51944 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.26■□□□□ 0.19
CcnfP51944 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.26■□□□□ 0.19
CcnfP51944 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CcnfP51944 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CcnfP51944 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.26■□□□□ 0.19
CcnfP51944 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CcnfP51944 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
CcnfP51944 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.26■□□□□ 0.19
CcnfP51944 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms