Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atoh1P48985 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atoh1P48985 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atoh1P48985 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atoh1P48985 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atoh1P48985 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atoh1P48985 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atoh1P48985 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atoh1P48985 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Atoh1P48985 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atoh1P48985 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.33■□□□□ 0.69
Atoh1P48985 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.33■□□□□ 0.68
Atoh1P48985 Mir5131-201ENSMUST00000175426 93 ntBASIC19.33■□□□□ 0.68
Atoh1P48985 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.33■□□□□ 0.68
Atoh1P48985 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atoh1P48985 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atoh1P48985 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Atoh1P48985 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Atoh1P48985 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atoh1P48985 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atoh1P48985 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Atoh1P48985 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.32■□□□□ 0.68
Atoh1P48985 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.32■□□□□ 0.68
Atoh1P48985 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atoh1P48985 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Atoh1P48985 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atoh1P48985 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.31■□□□□ 0.68
Atoh1P48985 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Gm13312-201ENSMUST00000119631 718 ntBASIC19.31■□□□□ 0.68
Atoh1P48985 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.31■□□□□ 0.68
Atoh1P48985 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atoh1P48985 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.31■□□□□ 0.68
Atoh1P48985 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.31■□□□□ 0.68
Atoh1P48985 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atoh1P48985 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.3■□□□□ 0.68
Atoh1P48985 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.3■□□□□ 0.68
Atoh1P48985 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.3■□□□□ 0.68
Atoh1P48985 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.3■□□□□ 0.68
Atoh1P48985 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.3■□□□□ 0.68
Atoh1P48985 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.3■□□□□ 0.68
Atoh1P48985 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atoh1P48985 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.29■□□□□ 0.68
Atoh1P48985 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.29■□□□□ 0.68
Atoh1P48985 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.29■□□□□ 0.68
Atoh1P48985 Gm11594-201ENSMUST00000122313 162 ntBASIC19.29■□□□□ 0.68
Atoh1P48985 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.29■□□□□ 0.68
Atoh1P48985 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Atoh1P48985 Gm8000-201ENSMUST00000188378 592 ntBASIC19.29■□□□□ 0.68
Atoh1P48985 Gm29707-201ENSMUST00000196325 491 ntBASIC19.29■□□□□ 0.68
Atoh1P48985 Gm44450-201ENSMUST00000199528 114 ntBASIC19.29■□□□□ 0.68
Atoh1P48985 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.29■□□□□ 0.68
Atoh1P48985 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Atoh1P48985 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Atoh1P48985 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atoh1P48985 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 Gm27867-201ENSMUST00000184778 125 ntBASIC19.28■□□□□ 0.68
Atoh1P48985 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.28■□□□□ 0.68
Atoh1P48985 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.28■□□□□ 0.68
Atoh1P48985 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atoh1P48985 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Atoh1P48985 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Atoh1P48985 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atoh1P48985 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms