Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Xcl1P47993 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Xcl1P47993 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Xcl1P47993 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Xcl1P47993 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Xcl1P47993 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Xcl1P47993 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Xcl1P47993 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Xcl1P47993 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Xcl1P47993 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Xcl1P47993 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.19□□□□□ -0.62
Xcl1P47993 Gm27045-201ENSMUST00000182145 1402 ntBASIC11.19□□□□□ -0.62
Xcl1P47993 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.19□□□□□ -0.62
Xcl1P47993 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Xcl1P47993 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.19□□□□□ -0.62
Xcl1P47993 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Xcl1P47993 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Xcl1P47993 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms