Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.38■□□□□ 0.37
Vps4bP46467 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Mir6982-201ENSMUST00000184354 68 ntBASIC17.38■□□□□ 0.37
Vps4bP46467 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps4bP46467 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps4bP46467 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
Vps4bP46467 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps4bP46467 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps4bP46467 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps4bP46467 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps4bP46467 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps4bP46467 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Vps4bP46467 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps4bP46467 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps4bP46467 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps4bP46467 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps4bP46467 Gm18666-201ENSMUST00000190039 958 ntBASIC17.36■□□□□ 0.37
Vps4bP46467 Gm7977-201ENSMUST00000193787 748 ntBASIC17.36■□□□□ 0.37
Vps4bP46467 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps4bP46467 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.35■□□□□ 0.37
Vps4bP46467 Gm20049-201ENSMUST00000219950 730 ntBASIC17.35■□□□□ 0.37
Vps4bP46467 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps4bP46467 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps4bP46467 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vps4bP46467 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.34■□□□□ 0.37
Vps4bP46467 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Gm27275-201ENSMUST00000184318 272 ntBASIC17.34■□□□□ 0.37
Vps4bP46467 Gm42545-201ENSMUST00000202755 922 ntBASIC17.34■□□□□ 0.37
Vps4bP46467 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps4bP46467 Gm4974-201ENSMUST00000209974 875 ntBASIC17.34■□□□□ 0.37
Vps4bP46467 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.34■□□□□ 0.37
Vps4bP46467 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps4bP46467 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps4bP46467 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms