Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkx2-6P43688 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.17■□□□□ 0.18
Nkx2-6P43688 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx2-6P43688 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Gm9103-201ENSMUST00000119371 405 ntBASIC16.16■□□□□ 0.18
Nkx2-6P43688 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.16■□□□□ 0.18
Nkx2-6P43688 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Nkx2-6P43688 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx2-6P43688 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Gm29518-201ENSMUST00000190858 372 ntBASIC16.15■□□□□ 0.18
Nkx2-6P43688 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.15■□□□□ 0.18
Nkx2-6P43688 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.15■□□□□ 0.18
Nkx2-6P43688 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-6P43688 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nkx2-6P43688 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nkx2-6P43688 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Gm7284-201ENSMUST00000131667 944 ntBASIC16.14■□□□□ 0.17
Nkx2-6P43688 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.14■□□□□ 0.17
Nkx2-6P43688 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Idnk-204ENSMUST00000226010 1898 ntBASIC16.14■□□□□ 0.17
Nkx2-6P43688 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-6P43688 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms