Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.36■□□□□ 0.21
Sox18P43680 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.36■□□□□ 0.21
Sox18P43680 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.36■□□□□ 0.21
Sox18P43680 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.36■□□□□ 0.21
Sox18P43680 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox18P43680 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox18P43680 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.35■□□□□ 0.21
Sox18P43680 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.35■□□□□ 0.21
Sox18P43680 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.35■□□□□ 0.21
Sox18P43680 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.35■□□□□ 0.21
Sox18P43680 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.35■□□□□ 0.21
Sox18P43680 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.35■□□□□ 0.21
Sox18P43680 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.35■□□□□ 0.21
Sox18P43680 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Sox18P43680 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.35■□□□□ 0.21
Sox18P43680 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox18P43680 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.34■□□□□ 0.21
Sox18P43680 Gm2651-201ENSMUST00000203560 838 ntBASIC16.34■□□□□ 0.21
Sox18P43680 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.34■□□□□ 0.21
Sox18P43680 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.34■□□□□ 0.21
Sox18P43680 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sox18P43680 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox18P43680 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox18P43680 Fst-202ENSMUST00000223640 2612 ntBASIC16.33■□□□□ 0.21
Sox18P43680 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox18P43680 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox18P43680 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox18P43680 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox18P43680 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.33■□□□□ 0.2
Sox18P43680 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.33■□□□□ 0.2
Sox18P43680 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox18P43680 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.32■□□□□ 0.2
Sox18P43680 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.32■□□□□ 0.2
Sox18P43680 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.32■□□□□ 0.2
Sox18P43680 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.32■□□□□ 0.2
Sox18P43680 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sox18P43680 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox18P43680 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox18P43680 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Sox18P43680 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Sox18P43680 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox18P43680 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Sox18P43680 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox18P43680 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.31■□□□□ 0.2
Sox18P43680 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox18P43680 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.31■□□□□ 0.2
Sox18P43680 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sox18P43680 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox18P43680 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox18P43680 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox18P43680 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.3■□□□□ 0.2
Sox18P43680 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox18P43680 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.3■□□□□ 0.2
Sox18P43680 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.3■□□□□ 0.2
Sox18P43680 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms