Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h1aP43275 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h1aP43275 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.13□□□□□ -0.15
Hist1h1aP43275 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Zfp783-201ENSMUST00000095946 670 ntBASIC14.13□□□□□ -0.15
Hist1h1aP43275 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.13□□□□□ -0.15
Hist1h1aP43275 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hist1h1aP43275 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Mir5133-201ENSMUST00000174955 77 ntBASIC14.12□□□□□ -0.15
Hist1h1aP43275 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hist1h1aP43275 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.12□□□□□ -0.15
Hist1h1aP43275 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hist1h1aP43275 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms