Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.37■□□□□ 0.21
Cdh4P39038 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.37■□□□□ 0.21
Cdh4P39038 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdh4P39038 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.36■□□□□ 0.21
Cdh4P39038 Gm11539-201ENSMUST00000119837 557 ntBASIC16.36■□□□□ 0.21
Cdh4P39038 Gm13436-201ENSMUST00000120418 567 ntBASIC16.36■□□□□ 0.21
Cdh4P39038 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Gm17661-201ENSMUST00000170317 270 ntBASIC16.36■□□□□ 0.21
Cdh4P39038 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cdh4P39038 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.36■□□□□ 0.21
Cdh4P39038 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.36■□□□□ 0.21
Cdh4P39038 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cdh4P39038 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdh4P39038 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.36■□□□□ 0.21
Cdh4P39038 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh4P39038 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.35■□□□□ 0.21
Cdh4P39038 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.35■□□□□ 0.21
Cdh4P39038 Gm43799-201ENSMUST00000201845 579 ntBASIC16.35■□□□□ 0.21
Cdh4P39038 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdh4P39038 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdh4P39038 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh4P39038 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdh4P39038 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdh4P39038 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh4P39038 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh4P39038 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cdh4P39038 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdh4P39038 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.34■□□□□ 0.21
Cdh4P39038 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdh4P39038 Gm7791-201ENSMUST00000219066 539 ntBASIC16.34■□□□□ 0.21
Cdh4P39038 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cdh4P39038 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cdh4P39038 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Cdh4P39038 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh4P39038 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh4P39038 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh4P39038 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.33■□□□□ 0.21
Cdh4P39038 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh4P39038 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh4P39038 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh4P39038 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Gm13559-201ENSMUST00000120476 863 ntBASIC16.33■□□□□ 0.2
Cdh4P39038 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdh4P39038 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Mir7071-201ENSMUST00000184847 69 ntBASIC16.33■□□□□ 0.2
Cdh4P39038 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.33■□□□□ 0.2
Cdh4P39038 Il3ra-202ENSMUST00000223589 738 ntBASIC16.33■□□□□ 0.2
Cdh4P39038 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.33■□□□□ 0.2
Cdh4P39038 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdh4P39038 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Cdh4P39038 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh4P39038 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdh4P39038 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms