Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.03■□□□□ 0.32
LdlrP35951 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.03■□□□□ 0.32
LdlrP35951 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.03■□□□□ 0.32
LdlrP35951 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LdlrP35951 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LdlrP35951 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Gm44549-201ENSMUST00000208351 577 ntBASIC17.02■□□□□ 0.32
LdlrP35951 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.02■□□□□ 0.32
LdlrP35951 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.02■□□□□ 0.32
LdlrP35951 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LdlrP35951 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LdlrP35951 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LdlrP35951 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LdlrP35951 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LdlrP35951 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LdlrP35951 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LdlrP35951 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LdlrP35951 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LdlrP35951 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Gm11643-201ENSMUST00000119578 864 ntBASIC17.01■□□□□ 0.31
LdlrP35951 Gm10698-201ENSMUST00000182663 604 ntBASIC17.01■□□□□ 0.31
LdlrP35951 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.01■□□□□ 0.31
LdlrP35951 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.01■□□□□ 0.31
LdlrP35951 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LdlrP35951 Gm11620-201ENSMUST00000118770 1845 ntBASIC17■□□□□ 0.31
LdlrP35951 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Gm21596-201ENSMUST00000178049 1316 ntBASIC17■□□□□ 0.31
LdlrP35951 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LdlrP35951 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Gm11249-201ENSMUST00000117071 859 ntBASIC17■□□□□ 0.31
LdlrP35951 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
LdlrP35951 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LdlrP35951 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LdlrP35951 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Flg-201ENSMUST00000050758 1488 ntBASIC16.99■□□□□ 0.31
LdlrP35951 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Gm15565-201ENSMUST00000118890 427 ntBASIC16.99■□□□□ 0.31
LdlrP35951 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LdlrP35951 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LdlrP35951 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LdlrP35951 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.99■□□□□ 0.31
LdlrP35951 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LdlrP35951 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.99■□□□□ 0.31
LdlrP35951 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.99■□□□□ 0.31
LdlrP35951 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LdlrP35951 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LdlrP35951 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.98■□□□□ 0.31
LdlrP35951 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.98■□□□□ 0.31
LdlrP35951 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.98■□□□□ 0.31
LdlrP35951 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LdlrP35951 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms