Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.28□□□□□ -0.12
Col8a2P25318 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a2P25318 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a2P25318 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a2P25318 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a2P25318 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a2P25318 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.27□□□□□ -0.13
Col8a2P25318 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col8a2P25318 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.27□□□□□ -0.13
Col8a2P25318 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Col8a2P25318 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.27□□□□□ -0.13
Col8a2P25318 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.27□□□□□ -0.13
Col8a2P25318 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.27□□□□□ -0.13
Col8a2P25318 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col8a2P25318 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col8a2P25318 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Col8a2P25318 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Gm23634-201ENSMUST00000175071 91 ntBASIC14.26□□□□□ -0.13
Col8a2P25318 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.26□□□□□ -0.13
Col8a2P25318 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.26□□□□□ -0.13
Col8a2P25318 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col8a2P25318 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col8a2P25318 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col8a2P25318 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.25□□□□□ -0.13
Col8a2P25318 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.25□□□□□ -0.13
Col8a2P25318 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.25□□□□□ -0.13
Col8a2P25318 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Col8a2P25318 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.25□□□□□ -0.13
Col8a2P25318 Gm7213-201ENSMUST00000215977 950 ntBASIC14.25□□□□□ -0.13
Col8a2P25318 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.25□□□□□ -0.13
Col8a2P25318 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col8a2P25318 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col8a2P25318 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Gm10013-201ENSMUST00000106074 672 ntBASIC14.24□□□□□ -0.13
Col8a2P25318 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.24□□□□□ -0.13
Col8a2P25318 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.24□□□□□ -0.13
Col8a2P25318 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms