Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Ccl1P10146 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccl1P10146 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccl1P10146 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccl1P10146 Gm40848-201ENSMUST00000221998 324 ntBASIC13.35□□□□□ -0.27
Ccl1P10146 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccl1P10146 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ccl1P10146 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl1P10146 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.34□□□□□ -0.27
Ccl1P10146 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccl1P10146 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ccl1P10146 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Ccl1P10146 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccl1P10146 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Gm43173-201ENSMUST00000202246 593 ntBASIC13.34□□□□□ -0.27
Ccl1P10146 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccl1P10146 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccl1P10146 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl1P10146 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccl1P10146 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl1P10146 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccl1P10146 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccl1P10146 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccl1P10146 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccl1P10146 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccl1P10146 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl1P10146 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccl1P10146 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccl1P10146 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl1P10146 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Ccl1P10146 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms