Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.84□□□□□ -0.51
Smim1P0C8K7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.84□□□□□ -0.51
Smim1P0C8K7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smim1P0C8K7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
Smim1P0C8K7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smim1P0C8K7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smim1P0C8K7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.83□□□□□ -0.52
Smim1P0C8K7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC11.83□□□□□ -0.52
Smim1P0C8K7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Smim1P0C8K7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smim1P0C8K7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms