Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.35□□□□□ -0.11
Hoxa3P02831 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa3P02831 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa3P02831 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.34□□□□□ -0.11
Hoxa3P02831 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.34□□□□□ -0.11
Hoxa3P02831 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa3P02831 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa3P02831 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa3P02831 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa3P02831 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa3P02831 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa3P02831 Gm18959-201ENSMUST00000208954 655 ntBASIC14.33□□□□□ -0.12
Hoxa3P02831 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxa3P02831 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa3P02831 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa3P02831 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa3P02831 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxa3P02831 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Idnk-204ENSMUST00000226010 1898 ntBASIC14.32□□□□□ -0.12
Hoxa3P02831 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hoxa3P02831 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Gm7638-201ENSMUST00000121348 967 ntBASIC14.32□□□□□ -0.12
Hoxa3P02831 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxa3P02831 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa3P02831 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxa3P02831 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa3P02831 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa3P02831 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.31□□□□□ -0.12
Hoxa3P02831 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms