Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syn1O88935 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Syn1O88935 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Syn1O88935 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.56■□□□□ 0.4
Syn1O88935 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Syn1O88935 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Syn1O88935 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.56■□□□□ 0.4
Syn1O88935 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Syn1O88935 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.56■□□□□ 0.4
Syn1O88935 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.56■□□□□ 0.4
Syn1O88935 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Syn1O88935 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Syn1O88935 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syn1O88935 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.56■□□□□ 0.4
Syn1O88935 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Gm11779-201ENSMUST00000118541 368 ntBASIC17.55■□□□□ 0.4
Syn1O88935 Gm15372-201ENSMUST00000120729 834 ntBASIC17.55■□□□□ 0.4
Syn1O88935 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Syn1O88935 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Syn1O88935 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.55■□□□□ 0.4
Syn1O88935 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.55■□□□□ 0.4
Syn1O88935 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Syn1O88935 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syn1O88935 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Syn1O88935 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Syn1O88935 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.54■□□□□ 0.4
Syn1O88935 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Syn1O88935 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.54■□□□□ 0.4
Syn1O88935 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Gm29791-202ENSMUST00000207888 369 ntBASIC17.54■□□□□ 0.4
Syn1O88935 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Gm6296-201ENSMUST00000222599 943 ntBASIC17.54■□□□□ 0.4
Syn1O88935 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.54■□□□□ 0.4
Syn1O88935 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Syn1O88935 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syn1O88935 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Syn1O88935 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.53■□□□□ 0.4
Syn1O88935 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Syn1O88935 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.53■□□□□ 0.4
Syn1O88935 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.53■□□□□ 0.4
Syn1O88935 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syn1O88935 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.52■□□□□ 0.4
Syn1O88935 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Gm23935-201ENSMUST00000102303 57 ntBASIC17.52■□□□□ 0.4
Syn1O88935 Gm24270-201ENSMUST00000102326 57 ntBASIC17.52■□□□□ 0.4
Syn1O88935 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.52■□□□□ 0.4
Syn1O88935 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syn1O88935 Gm12350-201ENSMUST00000121208 462 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms