Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.67■□□□□ 0.26
ClppO88696 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ClppO88696 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClppO88696 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ClppO88696 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ClppO88696 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ClppO88696 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.66■□□□□ 0.26
ClppO88696 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ClppO88696 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
ClppO88696 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClppO88696 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.66■□□□□ 0.26
ClppO88696 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.65■□□□□ 0.26
ClppO88696 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.65■□□□□ 0.26
ClppO88696 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.65■□□□□ 0.26
ClppO88696 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.65■□□□□ 0.26
ClppO88696 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.65■□□□□ 0.26
ClppO88696 Gm45058-201ENSMUST00000205810 766 ntBASIC16.65■□□□□ 0.26
ClppO88696 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.65■□□□□ 0.26
ClppO88696 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.65■□□□□ 0.26
ClppO88696 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.65■□□□□ 0.26
ClppO88696 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClppO88696 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
ClppO88696 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Gm2274-201ENSMUST00000184539 609 ntBASIC16.64■□□□□ 0.25
ClppO88696 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ClppO88696 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.64■□□□□ 0.25
ClppO88696 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ClppO88696 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ClppO88696 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ClppO88696 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ClppO88696 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ClppO88696 Gm12085-201ENSMUST00000119263 940 ntBASIC16.63■□□□□ 0.25
ClppO88696 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.63■□□□□ 0.25
ClppO88696 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.63■□□□□ 0.25
ClppO88696 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.63■□□□□ 0.25
ClppO88696 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.63■□□□□ 0.25
ClppO88696 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClppO88696 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ClppO88696 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ClppO88696 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.62■□□□□ 0.25
ClppO88696 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ClppO88696 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.62■□□□□ 0.25
ClppO88696 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ClppO88696 Gm6659-201ENSMUST00000174752 547 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms