Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a20bO88575 Idnk-204ENSMUST00000226010 1898 ntBASIC18.65■□□□□ 0.58
Slc6a20bO88575 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.64■□□□□ 0.58
Slc6a20bO88575 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc6a20bO88575 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.64■□□□□ 0.57
Slc6a20bO88575 Gm13186-201ENSMUST00000118031 316 ntBASIC18.64■□□□□ 0.57
Slc6a20bO88575 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20bO88575 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Phf7-203ENSMUST00000226565 1971 ntBASIC18.63■□□□□ 0.57
Slc6a20bO88575 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.63■□□□□ 0.57
Slc6a20bO88575 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20bO88575 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.62■□□□□ 0.57
Slc6a20bO88575 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.62■□□□□ 0.57
Slc6a20bO88575 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a20bO88575 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Gm27000-201ENSMUST00000182943 842 ntBASIC18.61■□□□□ 0.57
Slc6a20bO88575 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Slc6a20bO88575 Fst-202ENSMUST00000223640 2612 ntBASIC18.6■□□□□ 0.57
Slc6a20bO88575 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Gm12350-201ENSMUST00000121208 462 ntBASIC18.6■□□□□ 0.57
Slc6a20bO88575 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a20bO88575 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Slc6a20bO88575 Gm44357-201ENSMUST00000195897 142 ntBASIC18.59■□□□□ 0.57
Slc6a20bO88575 Gm19658-201ENSMUST00000196231 138 ntBASIC18.59■□□□□ 0.57
Slc6a20bO88575 Gm44367-201ENSMUST00000196836 138 ntBASIC18.59■□□□□ 0.57
Slc6a20bO88575 Gm44350-201ENSMUST00000197197 138 ntBASIC18.59■□□□□ 0.57
Slc6a20bO88575 Gm44390-201ENSMUST00000197533 144 ntBASIC18.59■□□□□ 0.57
Slc6a20bO88575 Gm44313-201ENSMUST00000198018 138 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms